Thoracic Research Centre
The UQ Thoracic Research Centre at The Prince Charles Hospital is a Centre of the PCH-Northside Clinical Unit at The University of Queensland. It is also closely aligned to the Thoracic Medicine Department of The Prince Charles Hospital.
Our Aim: ‘Research for Respiratory Health’
Our Purpose: ‘Improving lung health through translational, clinical, molecular and genomic research’
This Research Centre is focused on undertaking clinical, translational and scientific research to improve lung health, particularly relating to lung cancer, mesothelioma, and chronic airway diseases (chronic obstructive pulmonary disease - COPD, and asthma). The UQTRC has a multidisciplinary research team with medical staff, research nurses, a research laboratory and administration and management roles. The laboratory is a fully functional molecular laboratory, capable of most molecular genetic techniques and administers the extensive TPCH Lung Biobank, which supports research with lung research with specimens collected over a 20 year period. Funding to support research projects is currently obtained from a range of funding bodies including NHMRC, ARC, DDB, TPCH Foundation, Cancer Australia and the Cancer Council of Queensland.
Positions are available for staff and students - please contact us for information about current positions.
We are interested in enthusiastic people in the following areas:
- Health Practitioner, Science or Medical graduates seeking to contribute to lung health research
- Honours/Masters/PhD students wishing to make a difference to people with lung disease
- Volunteer researchers seeking to donate time and energy to advancing scientific research
- Summer students
The ACRF Centre for Lung Cancer Early Detection
The Australian Cancer Research Foundation (ACRF) Centre for Lung Cancer Early Detection is an Australia-wide multi-disciplinary research initiative, led by Professor Kwun Fong, and will conduct basic and clinical translational research into methods for detecting lung cancer at the earliest possible stage.
We have a number of exciting PhD opportunities available for prospective PhD students.
Our research spans diseases and platforms including:
- lung cancer, new ways of diagnosis, staging and treatment
- mesothelioma and asbestos disease
- COPD
- Microbiome and breath metabolome
- Chronic lung disease
- Promoting health lungs
- Insight into lung ageing
- Established and emerging threats to health such as air pollution and carcinogens such as asbestos
- Genetics and genomics, susceptibility, acquired mutations, SNP, eQTL
- Epigenetics and epigenomics
- TMAs and immunochemistry
- Digital PCR and ultrasensitive molecular detection
- CT Screening and early detection including breath testing for disease, liquid biopsies, risk prediction
- Tumour banking for accelerating scientific discoveries
- Collaborative international projects such as the IASLC TNM databases, TCGA
- Clinical guidelines and best practice
- Multidisciplinary care
- Advanced bronchoscopy and imaging
- Disease risk factors, prevention and risk prediction
- Translating research to the clinic for healthy lungs
Director of the UQTRC
Team Lead: Lung cancer
Phone: +61 7 3139 4000
Email: Kwun.Fong@health.qld.gov.au
Senior Researchers
Team Lead: Airways diseases - COPD, Asthma, Air pollution, Ageing
Phone: +61 7 3139 4000
Email: Ian.Yang@health.qld.gov.au
Associate Professor Rayleen Bowman
Team Lead: Mesothelioma
Phone: +61 7 3139 4000
Email: Rayleen.Bowman@health.qld.gov.au
Associate Professor Henry Marshall
Team Lead: Smoking Cessation, Lung Cancer
Phone: +61 7 3139 4000
Email: Henry.Marshall@health.qld.gov.au
Team Lead: Bronchoscopy, Lung Cancer Screening and Nodal Management
Email: gerard.olive@health.qld.gov.au
Dr Steven Leong
Team Lead: Interventional Bronchoscopy
Email: steven.leong@health.qld.gov.au
Clinical Research Team
Phone: +61 7 3139 4000
Jaccalyne (Jacci) Brady, Clinical Research Nurse
Project: Pulmonary Malignancy Conference
Email: PMC@health.qld.gov.au
Anita Goldsworthy, Clinical Research Nurse
Project: The Prince Charles Hospital Lung Bank
Email: lung_research@health.qld.gov.au
Rachel Bailey, Clinical Research Nurse
Project: Australian Lung Screen Trial
Email: alst@health.qld.gov.au
Sangmi (Sammy) Moloney, Clinical Research Nurse
Project: Thoracic Research
Email: lung_research@health.qld.gov.au
Peter Vardon, Clinical Research Nurse
Project: Smoking Cessation
Email: maxup@health.qld.gov.au
Rina Waller, Clinical Research Nurse
Project: Smoking Cessation
Email: maxup@health.qld.gov.au
Dr Victor Gallegos Rejas, Research Officer
Project: Smoking Cessation
Phone: +61 7 3443 3530
Email: v.gallegosrejas@uq.edu.au
Dr Hollie Bendotti, Postdoctoral Research Fellow
Email: h.bendotti@uq.edu.au
Laboratory team and researchers
Phone: +61 7 3139 4110
Email: uqtrc@uq.edu.au
Dr Kelly Chee, Postdoctoral Research Scientist
Email: t.chee@uq.edu.au
Caeli Zahra, Research Assistant
Email: c.zahra@uq.edu.au
Yanni Ong, Research Assistant
Email: yanni.ong@uq.edu.au
Edward Stephens, PhD Candidate
Project: Biomarkers of lung cancer in people who have never smoked
Email: edward.stephens@student.uq.edu.au
Jazmin Mireya Guayco Sigcha, PhD Candidate
Project: Blood Biomarkers in Lung Cancer screening
Email: jazmin.guaycosigcha@student.uq.edu.au
Dr Edwina Duhig, MPhil
Project: Microenvironment in Lung Diseases including non-small cell carcinoma
Email: e.duhig1@uq.edu.au
Janet Shaw, PhD Candidate
Project: COPD
Email: janet.shaw@uqconnect.edu.au
Nikita Patel
Project: Bone Density
Cindy Fu, Honours Student
Email: d.fu1@student.uq.edu.au
For a computer scientist to develop the app
Name: Developing a chat bot for smoking cessation
Duration: 3 years
Value: UQ PhD stipend
Smoking is a significant cause of disease and mortality globally. Helping smokers to quit is challenging. New technology, such as smartphone apps, could complement existing smoking cessation services but the optimal design, development and clinical impact of such systems remains uncertain and an emerging research area. An app that provides tailored rather than generic support to smokers, akin to counselling, may be beneficial.
Researchers from Queensland Health, University of Queensland and CSIRO are seeking a PhD candidate to conduct research into the development and testing of a conversation agent (or chat-bot) that will give individualised smoking cessation counselling and expert advice to smokers.
The ideal candidate will be keen to build bridges between computer science and health outcomes. They will possess a strong background in either computer science or linguistic studies. Knowledge of natural language processing, machine learning, computational logic would be looked upon favourably as well as a strong command of colloquial English.
This project has NHMRC funding. The research will be conducted under the supervision of Dr. Henry Marshall (Henry.Marshall@health.qld.gov.au) and Dr. David Ireland (d.ireland@csiro.au).
For further information contact Dr. David Ireland.
For a social scientist to run the pilot testing side
Name: Testing a chat bot for smoking cessation
Duration: 3 years
Value: UQ PhD stipend
Smoking is a significant cause of disease and mortality globally. Helping smokers to quit is challenging. New technology, such as smartphone apps, could complement existing smoking cessation services but the optimal design, development and clinical impact of such systems remains uncertain and is an emerging research area. An app that provides tailored rather than generic support to smokers, akin to counselling, may be beneficial.
We are looking for a qualified and enthusiastic PhD student with a behavioural change/psychology/social science or public health background to test and refine a prototype smoking cessation app in a clinical testing amongst consumers, patients and clinical experts in smoking cessation.
This project has NHMRC funding and involves collaboration between computer science, behavior change psychology and clinical medicine.
For further information contact Dr. Henry Marshall (Henry.Marshall@health.qld.gov.au)
See website for more details: https://graduate-school.uq.edu.au/phd-scholarships-health
For a clinical or biomedical scientist
Name: Lung Cancer Screening
Lung cancer is the major cause of cancer deaths and for the first time, there are starting to be reductions in lung cancer mortality from early detection/screening and effective systemic treatments.
We are undertaking and international CT lung cancer screening trial across Australia, Canada, Hong Kong and Spain.
We are looking for a qualified and enthusiastic PhD student with background in health, medicine or nursing, to participate in the screening study, to research implementation and barriers to uptake of this technology.
This project has NHMRC funding and involves collaboration between science, imaging, AI, nursing, health service delivery and clinical medicine.
A PhD scholarship is available for the successful applicant.
Please contact Professor Kwun Fong to discuss this opportunity kwun.fong@health.qld.gov.au
For a clinical or biomedical scientist
Name: Lung Cancer Biomarkers
Duration: 3 years
Value: UQ PhD stipend
Lung cancer is the major cause of cancer deaths and for the first time, there are starting to be reductions in lung cancer mortality from early detection/screening and effective systemic treatments
A major development has been the ability to use modern next gen sequencing and other ultra sensitive eg PCR techniques to identify tumour biomarkers in blood (liquid biomarkers) for the purpose of diagnosis, response prediction, monitoring and prognostication.
We are undertaking several clinical trials to determine the clinical validity and clinical utility for high priority lung cancer biomarker panels.
We are looking for a qualified and enthusiastic PhD student with background in health, medicine, surgery or nursing, to participate in these biomarker research projects, to test the value of these new next gen tests for optimising cancer detection and care
This project has NHMRC funding and involves collaboration between clinical medicine and surgery, molecular and sequencing experts, nursing and oncology.
Two PhD scholarships are available for successful applicants.
Please contact Professor Kwun Fong to discuss this opportunity kwun.fong@health.qld.gov.au
UQ Summer or Winter Research project description
Project title: | Translational genomics research to develop a new diagnostic test on exhaled breath condensates for lung disease |
|---|---|
Hours of engagement and delivery mode | 36 hrs per week for 6 weeks; primarily on-site at UQ Thoracic Research Centre, The Prince Charles Hospital. |
Description: | A leading candidate for non-invasive lung cancer screening is exhaled breath condensate (EBC), a favoured method of sampling exhaled breath, and a promising target for biomarkers of early-stage non-invasive disease detection. EBC collections involve performing breathing manoeuvres through a cooled apparatus inside which the breath condenses into a liquid which can be readily collected, stored and analysed. In recent years extracellular vesicles found in breath (bEVs) have gained interest in as a viable source of biomarkers in exhaled breath with potential clinical application in disease detection. This project aims to isolate and characterise bEVs and extract nucleic acid cargo and performed next-generation sequencing to evaluate differences between lung cancer patients with absent and heavy smoking histories and healthy controls. bEVs will be isolated from EBC samples by ultracentrifugation, and DNA, RNA and miRNA will be extracted from bEVS for downstream quality assessment to prepare for small RNA sequencing. |
Expected outcomes and deliverables: | The student will gain experience in handling human biological samples and learn standard and specialised lab techniques. It will be expected that a more refined protocol will be developed with supervisor support. Further, bEVs would have been isolated and RNA extracted, and quality checked. This could contribute to a publication or conference abstracts. |
Suitable for: | Biomedical student or pre-medical provisional students with some laboratory-based skills. |
Primary Supervisor:
| Prof. Ian Yang
|
Project title: | Validation of the proposed 9th TNM lung cancer staging system |
|---|---|
Hours of engagement and delivery mode | 36 hrs per week for 6 weeks; primarily on-site at UQ Thoracic Research Centre, The Prince Charles Hospital. |
Description: | In the process of cancer diagnosis, the tumour, node, and metastasis (TNM) staging facilitates a uniform classification which allows the physician and surgeons to come to a better understanding on the prognosis of the patient, which guides them to make judgement on management. The 9th edition TNM staging is newly released, thus, this project aims to compare the 9th edition TNM staging system to the 8th edition TNM staging cohort of lung cancer cases at TPCH. It will be determined whether the 9th edition better explains the observed survival in this cohort. This will be done by analysing clinical data that is obtained during lung cancer treatments. |
Expected outcomes and deliverables: | The expected outcome will include the student leaning skill like data analysis of large data sets. There will be generation of graphs and tables to support the analysis completed. This may contribute to conference abstracts or publication. |
Suitable for: | This project is open to pre-provisional medical students and students considering research projects or postgraduate research in thoracic research, particularly lung cancer. |
Primary Supervisor: | Prof. Kwun Fong |
Project title: | Key factors for successful implementation of immediate smoking cessation support in lung cancer care: A mixed-methods evaluation and realist review |
|---|---|
Hours of engagement and delivery mode | 6 weeks (From 12 Jan 2026 to 20 Feb 2026) Hours of engagement: 30 hours per week Delivery Mode: Hybrid, remote and on-site (Centre for Online Health, Building 33, PAH Hospital) |
Description: | Lung cancer remains the leading cause of cancer-related deaths globally, and smoking cessation after diagnosis significantly improves survival and treatment outcomes. However, implementing timely cessation support in clinical practice is a significant challenge. The Australian Health system has dedicated efforts to improve lung cancer outcomes. Thus, smoking cessation remains an opportunity to maximise them and translate them to clinical practice. As such, this project aims to identify the key factors that enable the successful implementation of immediate smoking cessation support for patients diagnosed with lung cancer. Using a combination of quantitative and qualitative methods embedded in a realist review approach, the projects aim to synthesise evidence to understand what works, for whom, in what contexts, and why. The review will explore mechanisms and contextual conditions that influence the uptake, delivery, and sustainability of rapid-access smoking cessation interventions within lung care pathways. Findings will inform practical recommendations for integrating evidence-based cessation support into routine lung cancer care, ultimately improving patient outcomes and health system efficiency. This project addresses a real-world problem with direct clinical and policy relevance, providing an opportunity to shape future models of care and inform national guidelines. |
Expected outcomes and deliverables: | What you will gain As a scholar on this project, you will develop expertise in formulating research questions for complex clinical problems, designing and executing comprehensive search strategies, and conducting data extraction and synthesis using Realist methodology. You may also gain experience in critical appraisal, implementation science frameworks, and knowledge translation for both clinical and policy audiences. You will work closely with experienced researchers, participate in team meetings, and have opportunities to build collaborative networks across leading research centres. This project offers strong career development prospects, including the chance to co-author a publication in a high-impact journal and/or present findings at an international conference. Your role You will be expected to:
Skills you will learn
Impact you will generate Your work will generate actionable insights to optimise smoking cessation support for lung cancer patients, influencing clinical practice, service redesign, and policy development nationally and internationally. Scholars in this project will gain expertise in designing a research question for a specific clinical problem, developing a comprehensive search strategy, and collecting data. About the centres: This project is a collaboration between the Thoracic Research Centre, the Centre for Online Health, and the Centre for Health Services Research, all part of the Faculty of Health, Medicine and Behavioural Sciences. The Centre for Online Health (COH) Centre for Health Service Research is an award-winning research centre with 25 years of experience in teaching and mentoring students. Their research has contributed to the development, implementation, and evaluation of telehealth and virtual care services both nationally and internationally. The COH is based at the Princess Alexandra Hospital. The Thoracic Research Centre (UQTRC) is a 20-year research centre dedicated to conducting clinical, translational, and scientific research aimed at improving lung health, particularly in relation to lung cancer, mesothelioma, and chronic airway disease. This is based at the Prince Charles Hospital. |
Suitable for: | Ideally, this project is targeted at postgraduate students with a background in medicine, public health or digital health. Other health-related sciences and academic backgrounds within the scope of the research can contact the primary supervisor for further information. |
Primary Supervisor:
| Dr Victor Gallegos-Rejas If you are interested, please get in touch with Dr Victor Gallegos-Rejas: v.gallegosrejas@uq.edu.au |
Contact
Address: UQ Thoracic Research Centre
Level 1 Clinical Sciences Building
The Prince Charles Hospital
Rode Rd Chermside 4032
Phone: +61 7 3139 4110
Email: uqtrc@uq.edu.au